BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D04SP1|AL425682
(747 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1402 0.0
>3x_Contig1578
Length = 13178
Score = 1402 bits (697), Expect = 0.0
Identities = 727/747 (97%)
Strand = Plus / Plus
Query: 1 tcaacgcaaaagctcgattttaaagccaaagttacatcgaggctagcttggccctgatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11239 tcaacgcaaaagctcgattttaaagccaaagttacatcgaggctagcttggccctgatgt 11298
Query: 61 aagacataatgtttcctctcacgttacaaatgaattgthagagcgacgtattactgcttc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 11299 aagacataatgtttcctctcacgttacaaatgaattgtaagagcgacgtattactgcttc 11358
Query: 121 gctcatccaatagatacccmcagctttttcttttttttaaccttcttgaatcctttttct 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11359 gctcatccaatagatacccacagctttttcttttttttaaccttcttgaatcctttttct 11418
Query: 181 ttttcagaacgtttgthtgtttgtttgacagtttcagataaahhatggcatcggtatgca 240
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 11419 ttttcagaacgtttgtatgtttgtttgacagtttcagataaaaaatggcatcggtatgca 11478
Query: 241 gaaaggtcaaaactgggtgtgatttamagtaatctaagtyatcgaattgggttaaagatt 300
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 11479 gaaaggtcaaaactgggtgtgatttaaagtaatctaagtaatcgaattgggttaaagatt 11538
Query: 301 ccmattatgaathabmmmggtttccmgcacactgagttctcttacttgttctacgtgagt 360
|| ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 11539 ccaattatgaataaaaaaggtttccagcacactgagttctcttacttgttctacgtgagt 11598
Query: 361 catactcccttaaagctcgaacaaatcamagtttatgctgtaccatggatgctacgggga 420
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11599 tatactcccttaaagctcgaacaaatcaaagtttatgctgtaccatggatgctacgggga 11658
Query: 421 gatggcttaatccggactgttctgagcctgtttgattgattattaacatctaahagccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11659 gatggcttaatccggactgttctgagcctgtttgattgattattaacatctaaaagccaa 11718
Query: 481 gcctttattttttagttttattcatgcattcgagaattcagttaaaggacataagatggg 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 11719 gcctttattttttagttttattcatgcattcgagaattcagtaaaaggacataagatggg 11778
Query: 541 tacgttgatgtctgcgagactagggtctgcacacccccattttaatggtatttttgccat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 11779 tacgttgatgtctgcgagactagggtctgcacacccccattttaatggtatttttgcaat 11838
Query: 601 tgaataagtttaattgtagtatgaagaaagggctagaagctttatcaaactattaaactc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11839 tgaataagtttaattgtagtatgaagaaagggctagaagctttatcaaactattaaactc 11898
Query: 661 ttggcagagatggggttttcatatctattcgatgttttcttttttcctttctgtcagatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11899 ttggcagagatggggttttcatatctattcgatgttttcttttttcctttctgtcagatt 11958
Query: 721 cgcaccagcgaaagtrataaacgtaga 747
||||||||||||||| |||||||||||
Sbjct: 11959 cgcaccagcgaaagtaataaacgtaga 11985
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5849
Number of Sequences: 1807
Number of extensions: 5849
Number of successful extensions: 214
Number of sequences better than 1.0e-20: 1
length of query: 747
length of database: 10,358,551
effective HSP length: 16
effective length of query: 731
effective length of database: 10,329,639
effective search space: 7550966109
effective search space used: 7550966109
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)